Scientific and Research Applications

WEBINAR: Yosemite Project – Part 5 (VIDEO)

WEBINAR: The Yosemite Project PART 5 --  Introduction and RDF Representation of FHIR for Clinical Data“Introduction and RDF Representation of FHIR for Clinical Data”

 

In case you missed last Friday’s webinar, Yosemite Project Part 5 “Introduction and RDF Representation of FHIR for Clinical Data” delivered by Josh Mandel, the recording and slides are now available (and posted below). The webinar was co-produced by SemanticWeb.com and DATAVERSITY.net and runs for one hour, including a Q&A session with the audience that attended the live broadcast.

If you watch this webinar, please use the comments section below to share your questions, comments, and ideas for webinars you would like to see in the future.

About the Webinar

In our series on The Yosemite Project, we explore RDF as a data standard for health data. In this presentation, we hear from Joshua Mandel, a physician and software engineer affiliated with Boston Children’s Hospital and Harvard Medical School. Josh will provide a lightning tour of Fast Healthcare Interoperability Resources (FHIR), an emerging clinical data standard, with a focus on its resource-oriented approach, and a discussion of how FHIR intersects with the Semantic Web. We’ll look at how FHIR represents links between entities; how FHIR represents concepts from standards-based vocabularies; and how a set of FHIR instance data can be represented in RDF.

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USDA, Agricultural Research Service & National Agricultural Library Select Symplectic as Their Research Information Management Provider

symplecticNovember 10, 2014 — The Agricultural Research Service (ARS), the USDA’s chief in-house scientific research agency, and the National Agricultural Library, one of four national US libraries, have selected Symplectic Elements as their first integrated research information management system. The system will allow the agency to better disseminate and report on the research conducted by the 2,000+ researchers across the agency.

The USDA Agricultural Research Service employs over 6,000 people and has a fiscal budget of over $1 billion, while the National Agricultural Library houses one of the world’s largest collections devoted to agriculture and its related sciences. Elements will allow the organization to automate a large part of their research information collection, build in-depth reports for analysis and in time be used to help populate the public-facing USDA VIVO research networking and discovery portal. Read more

NSF Awards $15M to DataONE Environmental Linked Data Project

dataoneMary Martialay of RPI News reports, “The National Science Foundation (NSF) has awarded $15 million to a team of environmental and earth science data researchers, including researchers at Rensselaer Polytechnic Institute, who are providing tools and infrastructure that improve access to vast amounts of scientific data. As part of the project, Rensselaer will provide semantic technology leadership to help improve scientific discovery, said Deborah McGuinness, director of the Rensselaer Web Science Center,  and Tetherless World Senior Constellation Chair and professor of computer science and cognitive science at Rensselaer.” Read more

Symplectic Takes Another Step In Helping Universities Engage In Research Collaboration And Discovery

sympintThis summer, Symplectic Limited become the first DuraSpace Registered Service Provider (RSP) for the VIVO Project, an open-source, open-ontology, open-process platform for hosting semantically structured information about the interests, activities and accomplishments of scientists and scholars. (See our coverage here.) “Universities want to capture all that their researchers do, collaborate and reuse the data the research brings out,” says Sabih Ali, head of brand at Symplectic. “A lot of them are looking to be a part of something like VIVO and join the whole semantic web technology movement, but they don’t have the capacity to do it themselves.”

Symplectic brings that to the table with its role as a services provider and the expertise in data quality, organization and transfer that it has thanks to being a developer of Elements, software that captures, collects and showcases institutional research, and which is used by many leading universities including Cambridge and Oxford. It also offers an open-source VIVO harvester for clients allows the ingestion of information into VIVO profiles using the rich data that Elements captures.

More recently, Symplectic has taken on the role of authorized services provider for Profiles Research Networking Software, as well. Profiles RNS is an NIH-funded open source tool to speed the process of finding researchers with specific areas of expertise for collaboration and professional networking. It’s based on the VIVO 1.4 ontology, with support for RDF, SPARQL, and Linked Open Data.

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Social Robot Jibo Has Enough Charm to Raise Nearly $600K

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Kris Holt of Tech News World reports, “A crowdfunding campaign for Jibo, a little robot designed to become one of the family, kicked off Wednesday on Indiegogo, and with 29 days remaining, it already has raised more than US$577,000 — nearly six times its $100,000 target. The voice-controlled robot with a friendly face is a do-it-all personal assistant. Communicating with users in a human voice, it can learn individual preferences, relay messages and reminders, and function as a video conferencing device, for starters. It can take pictures, provide information from the Web or apps, order food and display e-books.” Read more

Deep Neural Networks Could Help Discover Unique Particles Like Higgs Boson

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Derrick Harris of GigaOM reports, “Researchers from the University of California, Irvine, have published a paper demonstrating the effectiveness of deep learning in helping discover exotic particles such as Higgs bosons and supersymmetric particles. The research, which was published in Nature Communications, found that modern approaches to deep neural networks might be significantly more accurate than the types of machine learning scientists traditionally use for particle discovery and might also save scientists a lot of work. To get a sense of how challenging particle discovery is, consider that a collider can produce 100 billion collisions per hour and only about 300 will produce a Higgs boson. Because the particles decay almost immediately, scientists can’t expressly identify them, but instead must analyze (and sometimes infer) the products of their decay.” Read more

Cornell Team Teaching a Robot to Do Complex Tasks

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John Biggs of Tech Crunch reports, “A new research project by a computer science team at Cornell University is using human volunteers to train robots to perform tasks. How is it unique? They’re showing robots how to infer actions based on very complex, human comments. Instead of having to say ‘move arm left 5 inches’ they are hoping that, one day, robots will respond to ‘Make me some ramen’ or ‘Clean up my mess.’ The commands are quite rudimentary right now and focus mostly around loose requests like “boil the ramen for a few minutes” which, with enough processing, can be turned into a step-by-step set of commands. For example, in the video above a subject asks for an affogato, basically coffee with ice cream. The robot has learned the basic recipe and so uses what is at hand — a barrel of ice cream, a bowl, and a coffee dispenser — to produce a tasty treat for its human customer.” Read more

NSF Funds Claremont McKenna Mathematics Professor to Research Compressive Signal Processing

cmCLAREMONT, Calif.–(BUSINESS WIRE)–Claremont McKenna College assistant professor of mathematics Deanna Needell has been awarded a prestigious, five-year National Science Foundation CAREER grant of more than $413,000 for her research on the practical application of compressive signal processing (CSP). The grant, from the NSF’s Faculty Early Career Development Program, supports junior faculty who exemplify the role of teacher-scholars through outstanding research, excellent education, and integration of education and research within the context of the mission of their organizations. Read more

Does AI System Eugene Goostman Pass the Turing Test?

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Dante D’Orazio of The Verge reports, “Eugene Goostman seems like a typical 13-year-old Ukrainian boy — at least, that’s what a third of judges at a Turing Test competition this Saturday thought. Goostman says that he likes hamburgers and candy and that his father is a gynecologist, but it’s all a lie. This boy is a program created by computer engineers led by Russian Vladimir Veselov and Ukrainian Eugene Demchenko. That a third of judges were convinced that Goostman was a human is significant — at least 30 percent of judges must be swayed for a computer to pass the famous Turing Test. The test, created by legendary computer scientist Alan Turing in 1950, was designed to answer the question ‘Can machines think?’ and is a well-known staple of artificial intelligence studies.” Read more

“Watt-sun” Hopes to Improve Solar Power with Machine Learning

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Katie Fehrenbacher of GigaOM recently asked, “What happens when you leverage technologies like IBM’s artificial intelligence engine Watson for clean power? The answer is the awesomely named Watt-sun project, a machine learning platform that IBM Research has quietly been building over the last year, and which is now highly accurate at predicting how cloud cover, weather and atmosphere (among many other data points) affect the way solar panel systems operate.Solar forecasting has been around as long as solar panels have been plugged into the grid. But the forecasting systems historically haven’t been all that accurate, given that so many factors can contribute to the amount of sunlight that’s able to descend from the sky and onto the solar panel and then get converted into electricity.” Read more

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